Structure of PDB 5cl4 Chain A Binding Site BS02

Receptor Information

>5cl4 Chain A (length=231) Species: 1396 (Bacillus cereus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

VPMHPFVKALQEHFTAHQNPEKAEPMARYMKNHFLFLGIQTPERRQLLKD
IIQIHTLPDQKDFQIIIRELWDLPEREFQAAALDIMQKYKKHINETHIPF
LEELIVTKSWWDSVDSIVPTFLGDIFLKHPELISAYIPKWIASDNIWLQR
AAILFQLKYKQKMDEELLFWIIGQLHSSKEFFIQKAIGWVLREYAKTNPD
VVWEYVQNNELAPLSKREAIKHIKQNYGINN

Ligand information

>5cl4 Chain C (length=12) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

cggactttcggg

Receptor-Ligand Complex Structure

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Structure summary

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PDB	5cl4 The DNA glycosylase AlkD uses a non-base-flipping mechanism to excise bulky lesions.
Resolution	1.866 Å
Binding residue (original residue number in PDB)	T39 R43 R215
Binding residue (residue number reindexed from 1)	T41 R45 R217

Enzymatic activity

Enzyme Commision number

3.2.2.-

Gene Ontology

	Molecular Function
GO:0046872	metal ion binding

View graph for
Molecular Function

External links

PDB	RCSB:5cl4, PDBe:5cl4, PDBj:5cl4
PDBsum	5cl4
PubMed	26524531
UniProt	Q816E8

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