Structure of PDB 5cby Chain A Binding Site BS02

Receptor Information

>5cby Chain A (length=76) Species: 32644 (unidentified) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

PPKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIID
KIRRKNCPACRFRKCLQAGMNLEARK

Ligand information

>5cby Chain D (length=18) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

tcagaacactctgttctg

Receptor-Ligand Complex Structure

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PDB	5cby Distal substitutions drive divergent DNA specificity among paralogous transcription factors through subdivision of conformational space.
Resolution	1.997 Å
Binding residue (original residue number in PDB)	S440 F444 R447 R470 K471 R477
Binding residue (residue number reindexed from 1)	S24 F28 R31 R54 K55 R61
Binding affinity	PDBbind-CN: Kd=0.119uM

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003700	DNA-binding transcription factor activity
GO:0008270	zinc ion binding
GO:0043565	sequence-specific DNA binding

	Biological Process
GO:0006355	regulation of DNA-templated transcription

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Molecular Function

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Biological Process

External links

PDB	RCSB:5cby, PDBe:5cby, PDBj:5cby
PDBsum	5cby
PubMed	26715749
UniProt	P04150\|GCR_HUMAN Glucocorticoid receptor (Gene Name=NR3C1)

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