Structure of PDB 5bzn Chain A Binding Site BS02
Receptor Information
>5bzn Chain A (length=150) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NQIDLNVTCRYAGVFHVEKNGRYSISRTEAADLCQAFNSTLPTMDQMKLA
LSKGFETCRYGFIEGNVVIPRIHPNAICAANHTGVYILVTSNTSHYDTYC
FNASAPPEEDCTSVTDLPNSFDGPVTITIVNRDGTRYSKKGEYRTHQEDI
Ligand information
Ligand ID
4XD
InChI
InChI=1S/C12H18N2O/c1-15-8-7-14-6-5-10-3-2-4-12(13)11(10)9-14/h2-4H,5-9,13H2,1H3
InChIKey
IJXQCLYAKMPTMJ-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.9.2
COCCN1CCc2cccc(c2C1)N
CACTVS 3.385
COCCN1CCc2cccc(N)c2C1
ACDLabs 12.01
C1N(Cc2c(C1)cccc2N)CCOC
Formula
C12 H18 N2 O
Name
2-(2-methoxyethyl)-1,2,3,4-tetrahydroisoquinolin-8-amine
ChEMBL
DrugBank
ZINC
ZINC000379737629
PDB chain
5bzn Chain A Residue 203 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5bzn
Crystal structure of the murine cd44 hyaluronan binding domain complex with a small molecule
Resolution
1.23 Å
Binding residue
(original residue number in PDB)
D145 G146 P147
Binding residue
(residue number reindexed from 1)
D122 G123 P124
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005540
hyaluronic acid binding
Biological Process
GO:0007155
cell adhesion
Cellular Component
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5bzn
,
PDBe:5bzn
,
PDBj:5bzn
PDBsum
5bzn
PubMed
UniProt
P15379
|CD44_MOUSE CD44 antigen (Gene Name=Cd44)
[
Back to BioLiP
]