Structure of PDB 5b1l Chain A Binding Site BS02

Receptor Information
>5b1l Chain A (length=97) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PHRYHPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSS
AVMALQEACESYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER
Ligand information
>5b1l Chain J (length=145) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
atcaatatccacctgcagattctaccaaaagtgtatttggaaactgctcc
atcaaaaggcatgttcagctgaattcagctgaacatgccttttgatggag
cagtttccaaatacacttttggtagaatctgcaggtggatattga
Receptor-Ligand Complex Structure
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PDB5b1l Testis-Specific Histone Variant H3t Gene Is Essential for Entry into Spermatogenesis
Resolution2.35 Å
Binding residue
(original residue number in PDB)		H39 R40 Y41 P43 G44 V46 A47 K56 R63 K64 L65 R69 R83
Binding residue
(residue number reindexed from 1)		H2 R3 Y4 P6 G7 V9 A10 K19 R26 K27 L28 R32 R46
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006325 chromatin organization
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005694 chromosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5b1l, PDBe:5b1l, PDBj:5b1l
PDBsum5b1l
PubMed28099840
UniProtP68433|H31_MOUSE Histone H3.1 (Gene Name=H3c1)

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