Structure of PDB 5a7v Chain A Binding Site BS02

Receptor Information
>5a7v Chain A (length=368) Species: 818 (Bacteroides thetaiotaomicron) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PASGQPSNDKKNVLPDWAFGGFERPQGANPVISPIENTKFYCPMTQDYVA
WESNDTFNPAATLHDGKIVVLYRAEDKSGVGIGHRTSRLGYATSSDGIHF
KREKTPVFYPDNDTQKKLEWPGGCEDPRIAVTAEGLYVMTYTQWNRHIPR
LAIATSRNLKDWTKHGPAFAKAYDGKFFNLGCKSGSILTEVVNGKQVIKK
IDGKYFMYWGEEHVFAATSEDLVNWTPYVNTDGSLRKLFSPRDGHFDSQL
TECGPPAIYTPKGIVLLYNGKNSASRGDKRYTANVYAAGQALFDANDPTR
FITRLDEPFFRPMDSFEKSGQYVDGTVFIEGMVYYKDKWYLYYGCADSKV
GMAIYNPKKPAAADPLPA
Ligand information
Ligand IDMAN
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5+,6+/m1/s1
InChIKeyWQZGKKKJIJFFOK-PQMKYFCFSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341OC[C@H]1O[C@H](O)[C@@H](O)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@@H]([C@@H]([C@H](O1)O)O)O)O)O
ACDLabs 10.04OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namealpha-D-mannopyranose;
alpha-D-mannose;
D-mannose;
mannose
ChEMBLCHEMBL365590
DrugBank
ZINCZINC000003860903
PDB chain5a7v Chain A Residue 1485 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5a7v The Gh130 Family of Mannoside Phosphorylases Contains Glycoside Hydrolases that Target Beta-1,2 Mannosidic Linkages in Candida Mannan
Resolution1.35 Å
Binding residue
(original residue number in PDB)		R89 I98 E141 W160 K199
Binding residue
(residue number reindexed from 1)		R73 I82 E125 W144 K183
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds

View graph for
Molecular Function
External links
PDB RCSB:5a7v, PDBe:5a7v, PDBj:5a7v
PDBsum5a7v
PubMed26286752
UniProtQ8A186

[Back to BioLiP]