Structure of PDB 5a60 Chain A Binding Site BS02
Receptor Information
>5a60 Chain A (length=429) Species:
83333
(Escherichia coli K-12) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AMAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETPDNWLR
GHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLP
TEVWPNGELPADLASRVQPLFSTDFYREKWLVAVDDSRIEIALDQGEVKA
GEFAEPICELELELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLA
QGNPAREIKPTTILHVAAKADVEQGLEAAFELALAQWQYHEELWVRGNDA
AKEQVLAAIGLVRHALMLFGGIVPRKASTHLRDLLTQCEATIASAVSAVT
AVYSTETAMAKLALTEWLVSKAWQPFLDAKAQGKISDSFKRFADIHLSRH
AAELKSVFCQPLGDRYHDQLPRLTRDIDSILLLAGYYDPVVAQAWLENWQ
GLRHAIATGQRIEIEHFRNEANNQEPFWL
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
5a60 Chain A Residue 501 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5a60
Structural Determinants for Substrate Binding and Catalysis in Triphosphate Tunnel Metalloenzymes.
Resolution
1.82 Å
Binding residue
(original residue number in PDB)
E4 E6 E162
Binding residue
(residue number reindexed from 1)
E5 E7 E163
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.6.1.25
: triphosphatase.
Gene Ontology
Molecular Function
GO:0016787
hydrolase activity
GO:0046872
metal ion binding
GO:0050355
inorganic triphosphate phosphatase activity
View graph for
Molecular Function
External links
PDB
RCSB:5a60
,
PDBe:5a60
,
PDBj:5a60
PDBsum
5a60
PubMed
26221030
UniProt
P30871
|3PASE_ECOLI Inorganic triphosphatase (Gene Name=ygiF)
[
Back to BioLiP
]