Structure of PDB 4uhm Chain A Binding Site BS02

Receptor Information
>4uhm Chain A (length=435) Species: 306 (Pseudomonas sp.) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DLNLKAHWMPFSANRNFHKDPRIIVAAEGSWLVDDKGRRIYDSLSGLWTC
GAGHSRKEIADAVAKQIGTLDYSPGFQYGHPLSFQLAEKIAQMTPGTLDH
VFFTGSGSECADTSIKMARAYWRIKGQAQKTKLIGRARGYHGVNVAGTSL
GGIGGNRKMFGPLMDVDHLPHTLQPGMAFTKGAAETGGVELANELLKLIE
LHDASNIAAVIVEPMSGSAGVIVPPKGYLQRLREICDANDILLIFDEVIT
AFGRMGKATGAEYFGVTPDIMNVAKQVTNGAVPMGAVIASSEIYDTFMNQ
NLPEYAVEFGHGYTYSAHPVACAAGIAALDLLQKENLIQQSAELAPHFEK
ALHGLKGTKNVIDIRNCGLAGAIQIAARDGDAIVRPFEASMKLWKEGFYV
RFGGDTLQFGPTFNAKPEDLDRLFDAVGEALNGVA
Ligand information
Ligand IDPLP
InChIInChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)
InChIKeyNGVDGCNFYWLIFO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341Cc1ncc(CO[P](O)(O)=O)c(C=O)c1O
OpenEye OEToolkits 1.5.0Cc1c(c(c(cn1)COP(=O)(O)O)C=O)O
ACDLabs 10.04O=P(O)(O)OCc1cnc(c(O)c1C=O)C
FormulaC8 H10 N O6 P
NamePYRIDOXAL-5'-PHOSPHATE;
VITAMIN B6 Phosphate
ChEMBLCHEMBL82202
DrugBankDB00114
ZINCZINC000001532514
PDB chain4uhm Chain A Residue 1458 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4uhm A Beta-Alanine Catabolism Pathway Containing a Highly Promiscuous Omega-Transaminase in the 12-Aminododecanate-Degrading Pseudomonas Sp. Strain Aac.
Resolution1.33 Å
Binding residue
(original residue number in PDB)		G120 S121 Y153 H154 G155 E226 D259 V261 I262 K288
Binding residue
(residue number reindexed from 1)		G107 S108 Y140 H141 G142 E213 D246 V248 I249 K275
Annotation score4
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 30 20:29:19 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '4uhm', asym_id = 'A', bs = 'BS02', title = 'A Beta-Alanine Catabolism Pathway Containing a H...dodecanate-Degrading Pseudomonas Sp. Strain Aac. '
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='4uhm', asym_id='A', bs='BS02', title='A Beta-Alanine Catabolism Pathway Containing a H...dodecanate-Degrading Pseudomonas Sp. Strain Aac. ')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0008483,0030170', uniprot = '', pdbid = '4uhm', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0008483,0030170', uniprot='', pdbid='4uhm', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>