Structure of PDB 4p7w Chain A Binding Site BS02

Receptor Information
>4p7w Chain A (length=280) Species: 266835 (Mesorhizobium japonicum MAFF 303099) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ATTRILGVVQLDQRRLTDDLAVLAKSNFSSEYSDFACGRWEFCMLRNQSG
KQEEQRVVVHETPALATPLGQSLPYLNELLDNHFDRDSIRYARIIRISEN
ACIIPHRDYLELEGKFIRVHLVLDTNEKCSNTEENNIFHMGRGEIWFLDA
SLPHSAGCFSPTPRLHLVVDIEGTRSLEEVAINVEQPSARNATVDTRKEW
TDETLESVLGFSEIISEANYREIVAILAKLHFFHKVHCVDMYGWLKEICR
RRGEPALIEKANSLERFYLIDRAAGEVMTY
Ligand information
Ligand IDAKG
InChIInChI=1S/C5H6O5/c6-3(5(9)10)1-2-4(7)8/h1-2H2,(H,7,8)(H,9,10)
InChIKeyKPGXRSRHYNQIFN-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04O=C(O)C(=O)CCC(=O)O
OpenEye OEToolkits 1.7.6C(CC(=O)O)C(=O)C(=O)O
CACTVS 3.385OC(=O)CCC(=O)C(O)=O
FormulaC5 H6 O5
Name2-OXOGLUTARIC ACID
ChEMBLCHEMBL1686
DrugBankDB08845
ZINCZINC000001532519
PDB chain4p7w Chain A Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4p7w Refined Regio- and Stereoselective Hydroxylation of l-Pipecolic Acid by Protein Engineering of l-Proline cis-4-Hydroxylase Based on the X-ray Crystal Structure.
Resolution1.8 Å
Binding residue
(original residue number in PDB)		W40 H106 R118 H120 H154 A156 R164
Binding residue
(residue number reindexed from 1)		W40 H106 R118 H120 H154 A156 R164
Annotation score5
Enzymatic activity
Enzyme Commision number 1.14.11.56: L-proline cis-4-hydroxylase.
Gene Ontology
Molecular Function
GO:0016706 2-oxoglutarate-dependent dioxygenase activity
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0018193 peptidyl-amino acid modification

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Molecular Function
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Biological Process
External links
PDB RCSB:4p7w, PDBe:4p7w, PDBj:4p7w
PDBsum4p7w
PubMed25171735
UniProtQ989T9|P4H_RHILO L-proline cis-4-hydroxylase (Gene Name=mlr6283)

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