Structure of PDB 4p3i Chain A Binding Site BS02
Receptor Information
>4p3i Chain A (length=290) Species:
1097017
(Norovirus Hu/GI.7/TCH-060/USA/2003) [
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QLTVPNIPLNNLANSRVPAMINKMTVSTDQNQVVQFQNGRCTLEGQLLGT
TPVSASQVARIRGKVFSTASGKGLNLTELDGTPYHAFESPAPLGFPDIGA
CDWHVSTFKVDNLSGDPMSRLDVKQNAPFAPHLGSIEFTSDQDPTGDQLG
TLAWVSPSTSGARVDPWKIPSYGESTHLAPPIFPPGFGEAIVYFMSDFPI
VSGNTAQVPCTLPQEFVSHFVEQQAPVRGEAALLHYVDPDTHRNLGEFKL
YPDGFITCVPNTGGGPQNLPTNGVFVFSSWVSRYYQLKPV
Ligand information
Ligand ID
FUC
InChI
InChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3+,4+,5-,6+/m0/s1
InChIKey
SHZGCJCMOBCMKK-SXUWKVJYSA-N
SMILES
Software
SMILES
CACTVS 3.341
C[C@@H]1O[C@@H](O)[C@@H](O)[C@H](O)[C@@H]1O
ACDLabs 10.04
OC1C(O)C(OC(O)C1O)C
OpenEye OEToolkits 1.5.0
CC1C(C(C(C(O1)O)O)O)O
OpenEye OEToolkits 1.5.0
C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O)O)O)O
CACTVS 3.341
C[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
Formula
C6 H12 O5
Name
alpha-L-fucopyranose;
alpha-L-fucose;
6-deoxy-alpha-L-galactopyranose;
L-fucose;
fucose
ChEMBL
CHEMBL1232862
DrugBank
DB04473
ZINC
ZINC000001532814
PDB chain
4p3i Chain F Residue 3 [
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Receptor-Ligand Complex Structure
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PDB
4p3i
Structural analysis of determinants of histo-blood group antigen binding specificity in genogroup I noroviruses.
Resolution
1.6941 Å
Binding residue
(original residue number in PDB)
S345 G346
Binding residue
(residue number reindexed from 1)
S114 G115
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:4p3i
,
PDBe:4p3i
,
PDBj:4p3i
PDBsum
4p3i
PubMed
24648450
UniProt
G8FL04
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