Structure of PDB 4oja Chain A Binding Site BS02

Receptor Information
>4oja Chain A (length=149) Species: 6087 (Hydra vulgaris) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SAICVLEGIVKGTIKFEDIGDGKTHVSGKITGLQPPGKHGFHIHQFGDYS
GGCMSTGPHFNPFNKEHGGPEDENRHAGDLGNIVSDDYGNADVNIEDSQI
PLDGPNSIIGRALVVHQNEDDLGLGGHKDSKTTGNAGARLSCGVIGLAA
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain4oja Chain A Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4oja Structure of a Cu-Zn Superoxide dismutase at an evolutionary crossroad.
Resolution2.277 Å
Binding residue
(original residue number in PDB)		H62 H70 H79 D82
Binding residue
(residue number reindexed from 1)		H59 H67 H76 D79
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) H45 H47 H62 H70 H79 D82 H119 R142
Catalytic site (residue number reindexed from 1) H42 H44 H59 H67 H76 D79 H116 R139
Enzyme Commision number 1.15.1.1: superoxide dismutase.
Gene Ontology
Molecular Function
GO:0004784 superoxide dismutase activity
GO:0005507 copper ion binding
GO:0016491 oxidoreductase activity
GO:0046872 metal ion binding
Biological Process
GO:0006801 superoxide metabolic process
GO:0019430 removal of superoxide radicals

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:4oja, PDBe:4oja, PDBj:4oja
PDBsum4oja
PubMed
UniProtI3V7W8

[Back to BioLiP]