Structure of PDB 4nuq Chain A Binding Site BS02
Receptor Information
>4nuq Chain A (length=215) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
DFVIPPINLPENSRGPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGI
FIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVID
MNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIL
SQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPT
YGLSNTATAVITVTD
Ligand information
Ligand ID
CA
InChI
InChI=1S/Ca/q+2
InChIKey
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
Formula
Ca
Name
CALCIUM ION
ChEMBL
DrugBank
DB14577
ZINC
PDB chain
4nuq Chain A Residue 302 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4nuq
Structural and energetic determinants of adhesive binding specificity in type I cadherins.
Resolution
2.116 Å
Binding residue
(original residue number in PDB)
E11 E69 D100 M101 D103 D136
Binding residue
(residue number reindexed from 1)
E11 E69 D100 M101 D103 D136
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005509
calcium ion binding
Biological Process
GO:0007155
cell adhesion
GO:0007156
homophilic cell adhesion via plasma membrane adhesion molecules
GO:0098609
cell-cell adhesion
Cellular Component
GO:0005886
plasma membrane
GO:0016020
membrane
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4nuq
,
PDBe:4nuq
,
PDBj:4nuq
PDBsum
4nuq
PubMed
25253890
UniProt
P15116
|CADH2_MOUSE Cadherin-2 (Gene Name=Cdh2)
[
Back to BioLiP
]