Structure of PDB 4kwl Chain A Binding Site BS02
Receptor Information
>4kwl Chain A (length=187) Species:
10116
(Rattus norvegicus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TELLKPRTLADLIRILHELFAGDEVNVEEVQAVLEAYESNPAEWALYAKF
DQYRYTRNLVDQGNGKFNLMILCWGEGHGSSIHDHTDSHCFLKLLQGNLK
ETLFDWPDKKSNEMIKKSERTLRENQCAYINDSIGLHRVENVSHTEPAVS
LHLYSPPFDTCHAFDQRTGHKNKVTMTFHSKFGIRTP
Ligand information
Ligand ID
3SS
InChI
InChI=1S/C3H6O2S2/c4-3(5)1-2-7-6/h6H,1-2H2,(H,4,5)
InChIKey
CXXDUKKBFUFJDF-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
C(CSS)C(=O)O
CACTVS 3.370
OC(=O)CCSS
ACDLabs 12.01
O=C(O)CCSS
Formula
C3 H6 O2 S2
Name
3-disulfanylpropanoic acid
ChEMBL
DrugBank
ZINC
PDB chain
4kwl Chain A Residue 302 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4kwl
Mechanistic implications of persulfenate and persulfide binding in the active site of cysteine dioxygenase.
Resolution
1.63 Å
Binding residue
(original residue number in PDB)
Y58 R60 L75 H86 H140 V142 H155 Y157
Binding residue
(residue number reindexed from 1)
Y55 R57 L72 H83 H137 V139 H152 Y154
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.13.11.20
: cysteine dioxygenase.
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0008198
ferrous iron binding
GO:0008270
zinc ion binding
GO:0016151
nickel cation binding
GO:0016702
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0017172
cysteine dioxygenase activity
GO:0046872
metal ion binding
GO:0051213
dioxygenase activity
Biological Process
GO:0006534
cysteine metabolic process
GO:0007595
lactation
GO:0019448
L-cysteine catabolic process
GO:0033762
response to glucagon
GO:0042412
taurine biosynthetic process
GO:0043200
response to amino acid
GO:0045471
response to ethanol
GO:0046439
L-cysteine metabolic process
GO:0051384
response to glucocorticoid
GO:0051591
response to cAMP
Cellular Component
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4kwl
,
PDBe:4kwl
,
PDBj:4kwl
PDBsum
4kwl
PubMed
24084026
UniProt
P21816
|CDO1_RAT Cysteine dioxygenase type 1 (Gene Name=Cdo1)
[
Back to BioLiP
]