Structure of PDB 4kqb Chain A Binding Site BS02
Receptor Information
>4kqb Chain A (length=419) Species:
6239
(Caenorhabditis elegans) [
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PHQPIPPSLGEKDLSDPFNFLFSSNKITLRKLYDLTKNVDFDQLRQNECK
KNITLSKFWEEDDNWERFYSNIGSCSVYSDDQMIDNLLHDLNTSPIKHVH
IMDGGTQVKFVFTFKNDKQAVFKPMRFGRDYESDPNHFYFSDFERHHAEI
ATFHLDRVLGFRRAIPTVGRVLNMTTELFEKAEKKLKKTFFFSPAKNFCF
VSRCDYYCDTTHAICGLPDMKEGSVQVFLPDESAVPRKHNRSPYRRTYSK
KNQVAEWQSSMNYCTDKVKTKRQYAHGRRLLDLVDIHILDYLIGNQDRHH
FESFNVFNDLPSYAIHLDHGRAFGRSDFDDDDIILPLRQCCILRPSTFQT
LMNFYSTPKSLTKALHESLSKDPAHPILAYKHYPAMERRLAKIMSHILEC
FESRGVAEVLVAEYNNPDV
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
4kqb Chain A Residue 608 [
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Receptor-Ligand Complex Structure
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PDB
4kqb
Crystal structure of the Golgi casein kinase.
Resolution
3.045 Å
Binding residue
(original residue number in PDB)
M171 G174 T175 Q176 K178 V190 E213 Q295 F297 L298 L386 D387
Binding residue
(residue number reindexed from 1)
M102 G105 T106 Q107 K109 V121 E144 Q226 F228 L229 L317 D318
Annotation score
5
Enzymatic activity
Enzyme Commision number
2.7.11.1
: non-specific serine/threonine protein kinase.
External links
PDB
RCSB:4kqb
,
PDBe:4kqb
,
PDBj:4kqb
PDBsum
4kqb
PubMed
23754375
UniProt
Q9XTW2
|FA20C_CAEEL Extracellular serine/threonine protein kinase CeFam20 (Gene Name=famk-1)
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