Structure of PDB 4jd0 Chain A Binding Site BS02

Receptor Information
>4jd0 Chain A (length=245) Species: 243274 (Thermotoga maritima MSB8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FQGAMREAIVLASGAGKRLRSVTGDVPKVFYRFDGCELVKYPMISLMKNG
VERFVLVVSEGYRDLGEKVLNDLGVEGIVVENKKVELGNAYSFFLSEPYV
ESEKFFLSCGDSLFPPSALKSAFSEDEFHIKLGVSKRSDLIDPEKASKVL
VNENRIVKIGKRIDQYNYFDTGVFVMTKKVYSLKESFSWTEDISLYHVLQ
KAVDTGMIVKVFDFGNALWTEIDSPADLNSKVYELMSKIKEGVAC
Ligand information
Ligand IDPO4
InChIInChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)/p-3
InChIKeyNBIIXXVUZAFLBC-UHFFFAOYSA-K
SMILES
SoftwareSMILES
CACTVS 3.341[O-][P]([O-])([O-])=O
ACDLabs 10.04[O-]P([O-])([O-])=O
OpenEye OEToolkits 1.5.0[O-]P(=O)([O-])[O-]
FormulaO4 P
NamePHOSPHATE ION
ChEMBL
DrugBankDB14523
ZINC
PDB chain4jd0 Chain A Residue 304 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4jd0 Structure of the inositol-1-phosphate cytidylyltransferase from Thermotoga maritima.
Resolution1.8 Å
Binding residue
(original residue number in PDB)		D122 K127 N150 V207 F208
Binding residue
(residue number reindexed from 1)		D126 K131 N154 V211 F212
Annotation score3
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 15 17:48:35 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '4jd0', asym_id = 'A', bs = 'BS02', title = 'Structure of the inositol-1-phosphate cytidylyltransferase from Thermotoga maritima.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='4jd0', asym_id='A', bs='BS02', title='Structure of the inositol-1-phosphate cytidylyltransferase from Thermotoga maritima.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0009058', uniprot = '', pdbid = '4jd0', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0009058', uniprot='', pdbid='4jd0', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>