Structure of PDB 4j9l Chain A Binding Site BS02
Receptor Information
>4j9l Chain A (length=430) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GPHMATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGI
IAVSYEARAFGVTRSMWADDAKKLCPDLLLAQVRESRGKANLTKYREASV
EVMEIMSRFAVIERASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYI
EGLPQGPTVQKEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRA
AIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPI
RKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMC
RGIEHDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERL
TKDRNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTV
IKNCNTSGIQTEWSPPLTMLFLCATKFSAS
Ligand information
>4j9l Chain P (length=9) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tacgtcatc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4j9l
Mechanism of somatic hypermutation at the WA motif by human DNA polymerase eta.
Resolution
1.85 Å
Binding residue
(original residue number in PDB)
R61 S257 G259 G260 K261 L262 R377 L381 R382 C384
Binding residue
(residue number reindexed from 1)
R64 S255 G257 G258 K259 L260 R375 L379 R380 C382
Enzymatic activity
Enzyme Commision number
2.7.7.7
: DNA-directed DNA polymerase.
Gene Ontology
Molecular Function
GO:0003684
damaged DNA binding
Biological Process
GO:0006281
DNA repair
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:4j9l
,
PDBe:4j9l
,
PDBj:4j9l
PDBsum
4j9l
PubMed
23630267
UniProt
Q9Y253
|POLH_HUMAN DNA polymerase eta (Gene Name=POLH)
[
Back to BioLiP
]