Structure of PDB 4i7w Chain A Binding Site BS02

Receptor Information
>4i7w Chain A (length=294) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MFKGSIPALITPFTDNGAVDEQAFAAHVEWQIAEGSNGLVPVGTTGESPT
LSHDEHKRVVELCIEVAAKRVPVIAGAGSNNTDEAIELALHAQDAGADAL
LVVTPYYNKPTQKGLFAHFSAVAEAVKLPIVIYNIPPRSVVDMSPETMGA
LVKAHKNIVGVKDATGKLDRVSEQRISCGKDFIQLSGEDSTALGFNAHGG
VGCISVSANVAPRLCSEFQAAMLAGDYAKALEYQDRLMPLHRAIFMEPGV
CGTKYALSKTRGCNRKVRSPLMSTLEPATEAAIDAALKHAGLMN
Ligand information
Ligand IDLYS
InChIInChI=1S/C6H14N2O2/c7-4-2-1-3-5(8)6(9)10/h5H,1-4,7-8H2,(H,9,10)/p+1/t5-/m0/s1
InChIKeyKDXKERNSBIXSRK-YFKPBYRVSA-O
SMILES
SoftwareSMILES
CACTVS 3.341N[CH](CCCC[NH3+])C(O)=O
ACDLabs 10.04O=C(O)C(N)CCCC[NH3+]
OpenEye OEToolkits 1.5.0C(CC[NH3+])C[C@@H](C(=O)O)N
CACTVS 3.341N[C@@H](CCCC[NH3+])C(O)=O
OpenEye OEToolkits 1.5.0C(CC[NH3+])CC(C(=O)O)N
FormulaC6 H15 N2 O2
NameLYSINE
ChEMBL
DrugBank
ZINC
PDB chain4i7w Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4i7w Structure, function and allostery of the bona fide DHDPS from the plant pathogen Agrobacterium tumefaciens
Resolution1.3 Å
Binding residue
(original residue number in PDB)		N80 E84
Binding residue
(residue number reindexed from 1)		N80 E84
Annotation score2
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sat Nov 16 10:19:40 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '4i7w', asym_id = 'A', bs = 'BS02', title = 'Structure, function and allostery of the bona fi...from the plant pathogen Agrobacterium tumefaciens'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='4i7w', asym_id='A', bs='BS02', title='Structure, function and allostery of the bona fi...from the plant pathogen Agrobacterium tumefaciens')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0008840,0009089,0016829', uniprot = '', pdbid = '4i7w', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0008840,0009089,0016829', uniprot='', pdbid='4i7w', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>