Structure of PDB 4f4w Chain A Binding Site BS02
Receptor Information
>4f4w Chain A (length=342) Species:
273057,330779
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MIVIFVDFDYFFAQVEEVLNPQYKGKPLVVCVYSGRTKTSGAVATANYEA
RKLGVKAGMPIIKAMQIAPSAIYVPMRKPIYEAFSNRIMNLLNKHADKIE
VASIDEAYLDVTNKVEGNFENGIELARKIKQEILEKEKITVTVGVAPNKI
LAKIIADKSKPNGLGVIRPTEVQDFLNELDIDEIPGIGSVLARRLNELGI
QKLRDILSKNYNELEKITGKAKALYLLKLAQDEYNEPIRTRVRKSIGRIV
TMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRG
RTFPHGISKETAYSESVKLLQKILEEDERKIRRIGVRFSKFI
Ligand information
>4f4w Chain T (length=15) [
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cggccgatcagtgcc
Receptor-Ligand Complex Structure
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PDB
4f4w
Y-family polymerase conformation is a major determinant of fidelity and translesion specificity.
Resolution
1.898 Å
Binding residue
(original residue number in PDB)
V32 S34 G41 A42 G219 A221 R243 K244 S245 G247 R248 I249 T251 L294 R332 R333 R337
Binding residue
(residue number reindexed from 1)
V32 S34 G41 A42 G219 A221 R243 K244 S245 G247 R248 I249 T251 L294 R332 R333 R337
Enzymatic activity
Enzyme Commision number
2.7.7.7
: DNA-directed DNA polymerase.
Gene Ontology
Molecular Function
GO:0003684
damaged DNA binding
GO:0003887
DNA-directed DNA polymerase activity
Biological Process
GO:0006281
DNA repair
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Molecular Function
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Biological Process
External links
PDB
RCSB:4f4w
,
PDBe:4f4w
,
PDBj:4f4w
PDBsum
4f4w
PubMed
23245850
UniProt
Q4JB80
|DPO4_SULAC DNA polymerase IV (Gene Name=dbh);
Q97W02
|DPO4_SACS2 DNA polymerase IV (Gene Name=dbh)
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