Structure of PDB 4ew0 Chain A Binding Site BS02
Receptor Information
>4ew0 Chain A (length=143) Species:
10090
(Mus musculus) [
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WTPPRSPFNLVQEILFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPS
AEVARAADWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIELHGI
GKYGNDSYRIFCVNEWKQVHPENHKLNKYHDWLWENHEKLSLS
Ligand information
>4ew0 Chain C (length=11) [
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ccatgugctga
Receptor-Ligand Complex Structure
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PDB
4ew0
Excision of thymine and 5-hydroxymethyluracil by the MBD4 DNA glycosylase domain: structural basis and implications for active DNA demethylation.
Resolution
2.39 Å
Binding residue
(original residue number in PDB)
L421 Q423 L440 N441 R442 T443 S444 K446 G510 I511 G512 Y514 N534 K536
Binding residue
(residue number reindexed from 1)
L10 Q12 L29 N30 R31 T32 S33 K35 G99 I100 G101 Y103 N123 K125
Enzymatic activity
Enzyme Commision number
3.2.2.-
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003824
catalytic activity
Biological Process
GO:0006281
DNA repair
GO:0006284
base-excision repair
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Molecular Function
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Biological Process
External links
PDB
RCSB:4ew0
,
PDBe:4ew0
,
PDBj:4ew0
PDBsum
4ew0
PubMed
22740654
UniProt
Q9Z2D7
|MBD4_MOUSE Methyl-CpG-binding domain protein 4 (Gene Name=Mbd4)
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