Structure of PDB 4ecs Chain A Binding Site BS02
Receptor Information
>4ecs Chain A (length=430) Species:
9606
(Homo sapiens) [
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GPHMATGQDRVVALVDMDCFFVQVEQRQNPHLRNKPCAVVQYKSWKGGGI
IAVSYEARAFGVTRSMWADDAKKLCPDLLLAQVRESRGKANLTKYREASV
EVMEIMSRFAVIERASIDEAYVDLTSAVQERLQKLQGQPISADLLPSTYI
EGLPQGPTVQKEGMRKQGLFQWLDSLQIDNLTSPDLQLTVGAVIVEEMRA
AIERETGFQCSAGISHNKVLAKLACGLNKPNRQTLVSHGSVPQLFSQMPI
RKIRSLGGKLGASVIEILGIEYMGELTQFTESQLQSHFGEKNGSWLYAMC
RGIEHDPVKPRQLPKTIGCSKNFPGKTALATREQVQWWLLQLAQELEERL
TKDRNDNDRVATQLVVSIRVQGDKRLSSLRRCCALTRYDAHKMSHDAFTV
IKNCNTSGIQTEWSPPLTMLFLCATKFSAS
Ligand information
>4ecs Chain P (length=9) [
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agcgtcata
Receptor-Ligand Complex Structure
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PDB
4ecs
Watching DNA polymerase eta make a phosphodiester bond
Resolution
1.951 Å
Binding residue
(original residue number in PDB)
F18 R61 S113 D115 E116 K224 S257 G259 K261 L262 R377 L381 R382 C384
Binding residue
(residue number reindexed from 1)
F21 R64 S116 D118 E119 K222 S255 G257 K259 L260 R375 L379 R380 C382
Enzymatic activity
Catalytic site (original residue number in PDB)
D13 M14 Y52 R55 R61 S113 D115 E116 K231
Catalytic site (residue number reindexed from 1)
D16 M17 Y55 R58 R64 S116 D118 E119 K229
Enzyme Commision number
2.7.7.7
: DNA-directed DNA polymerase.
Gene Ontology
Molecular Function
GO:0003684
damaged DNA binding
Biological Process
GO:0006281
DNA repair
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:4ecs
,
PDBe:4ecs
,
PDBj:4ecs
PDBsum
4ecs
PubMed
22785315
UniProt
Q9Y253
|POLH_HUMAN DNA polymerase eta (Gene Name=POLH)
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