Structure of PDB 4do3 Chain A Binding Site BS02

Receptor Information
>4do3 Chain A (length=543) Species: 10116 (Rattus norvegicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GRQKARGAATRARQKQRASLETMDKAVQRFRLQNPDLDSEALLTLPLLQL
VQKLQSGELSPEAVFFTYLGKAWEVNKGTNCVTSYLTDCETQLSQAPRQG
LLYGVPVSLKECFSYKGHDSTLGLSLNEGMPSESDCVVVQVLKLQGAVPF
VHTNVPQSMLSFDCSNPLFGQTMNPWKSSKSPGGSSGGEGALIGSGGSPL
GLGTDIGGSIRFPSAFCGICGLKPTGNRLSKSGLKGCVYGQTAVQLSLGP
MARDVESLALCLKALLCEHLFTLDPTVPPLPFREEVYRSSRPLRVGYYET
DNYTMPSPAMRRALIETKQRLEAAGHTLIPFLPNNIPYALEVLSAGGLFS
DGGRSFLQNFKGDFVDPCLGDLILILRLPSWFKRLLSLLLKPLFPRLAAF
LNSMRPRSAEKLWKLQHEIEMYRQSVIAQWKAMNLDVLLTPMLGPALDLN
TPGRATGAISYTVLYNCLDFPAGVVPVTTVTAEDDAQMELYKGYFGDIWD
IILKKAMKNSVGLPVAVQCVALPWQEELCLRFMREVEQLMTPQ
Ligand information
Ligand ID0LA
InChIInChI=1S/C15H12ClNO2/c1-8(15(18)19)9-2-4-11-12-7-10(16)3-5-13(12)17-14(11)6-9/h2-8,17H,1H3,(H,18,19)/t8-/m0/s1
InChIKeyPUXBGTOOZJQSKH-QMMMGPOBSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.6C[C@@H](c1ccc2c3cc(ccc3[nH]c2c1)Cl)C(=O)O
CACTVS 3.385C[CH](C(O)=O)c1ccc2c([nH]c3ccc(Cl)cc23)c1
CACTVS 3.385C[C@H](C(O)=O)c1ccc2c([nH]c3ccc(Cl)cc23)c1
OpenEye OEToolkits 1.7.6CC(c1ccc2c3cc(ccc3[nH]c2c1)Cl)C(=O)O
ACDLabs 12.01O=C(O)C(c3ccc2c1cc(Cl)ccc1nc2c3)C
FormulaC15 H12 Cl N O2
Name(2S)-2-(6-chloro-9H-carbazol-2-yl)propanoic acid;
(S)-carprofen
ChEMBLCHEMBL2171249
DrugBank
ZINCZINC000000020235
PDB chain4do3 Chain A Residue 602 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4do3 A Binding Site for Nonsteroidal Anti-inflammatory Drugs in Fatty Acid Amide Hydrolase.
Resolution2.25 Å
Binding residue
(original residue number in PDB)		L192 F381 F432 M436 T488 W531
Binding residue
(residue number reindexed from 1)		L160 F349 F400 M404 T456 W499
Annotation score1
Binding affinityMOAD: ic50=74uM
PDBbind-CN: -logKd/Ki=4.10,IC50=79uM
BindingDB: IC50=32000nM
Enzymatic activity
Catalytic site (original residue number in PDB) K142 S217 S218 T236 I238 G239 G240 S241 F244
Catalytic site (residue number reindexed from 1) K110 S185 S186 T204 I206 G207 G208 S209 F212
Enzyme Commision number 3.1.1.-
3.5.1.99: fatty acid amide hydrolase.
Gene Ontology
Molecular Function
GO:0004040 amidase activity
GO:0005515 protein binding
GO:0005543 phospholipid binding
GO:0008289 lipid binding
GO:0016787 hydrolase activity
GO:0016788 hydrolase activity, acting on ester bonds
GO:0017064 fatty acid amide hydrolase activity
GO:0042802 identical protein binding
GO:0047372 monoacylglycerol lipase activity
Biological Process
GO:0006631 fatty acid metabolic process
GO:0009062 fatty acid catabolic process
GO:0016042 lipid catabolic process
GO:0045907 positive regulation of vasoconstriction
GO:0052651 monoacylglycerol catabolic process
GO:0150036 regulation of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission
Cellular Component
GO:0000139 Golgi membrane
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0005794 Golgi apparatus
GO:0016020 membrane
GO:0031090 organelle membrane
GO:0098793 presynapse
GO:0098794 postsynapse
GO:0098978 glutamatergic synapse

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4do3, PDBe:4do3, PDBj:4do3
PDBsum4do3
PubMed23240907
UniProtP97612|FAAH1_RAT Fatty-acid amide hydrolase 1 (Gene Name=Faah)

[Back to BioLiP]