Structure of PDB 4dec Chain A Binding Site BS02

Receptor Information

>4dec Chain A (length=284) Species: 83332 (Mycobacterium tuberculosis H37Rv) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

ALPLDTTWHRPGWTIGELEAAKAGRTISVVLPALNEEATIESVIDSISPL
VDGLVDELIVLDSGSTDDTEIRAIASGARVVSREQALPEVPVRPGKGEAL
WRSLAATSGDIVVFIDSDLINPHPLFVPWLVGPLLTGEGIQLVKSFYRGG
RVTELVARPLLAALRPELGCVLQPLSGEYAASRELLTSLPFAPGYGVEIG
LLIDTFDRLGLDAIAQVNLGVRAHRNRPLDELGAMSRQVIATLLSRCGIP
DSGVGLTQFLPGSDYTRHTWPVSLVDRPPMKVMR

Ligand information

Ligand ID

InChI

InChI=1S/Mn/q+2

InChIKey

WAEMQWOKJMHJLA-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mn+2]
CACTVS 3.341	[Mn++]

Formula

Name

MANGANESE (II) ION

PDB chain

4dec Chain A Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	4dec Mechanistic insights into the retaining glucosyl-3-phosphoglycerate synthase from mycobacteria.
Resolution	1.98 Å
Binding residue (original residue number in PDB)	D136 H258
Binding residue (residue number reindexed from 1)	D118 H224
Annotation score	1

Enzymatic activity

Enzyme Commision number

2.4.1.266: glucosyl-3-phosphoglycerate synthase.

Gene Ontology

	Molecular Function
GO:0000287	magnesium ion binding
GO:0016757	glycosyltransferase activity
GO:0016758	hexosyltransferase activity
GO:0042803	protein homodimerization activity
GO:0046872	metal ion binding

	Biological Process
GO:0006011	UDP-glucose metabolic process

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Molecular Function

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Biological Process

External links

PDB	RCSB:4dec, PDBe:4dec, PDBj:4dec
PDBsum	4dec
PubMed	22637481
UniProt	P9WMW9\|GPGS_MYCTU Glucosyl-3-phosphoglycerate synthase (Gene Name=gpgS)

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