Structure of PDB 4bqi Chain A Binding Site BS02

Receptor Information
>4bqi Chain A (length=824) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KISAKANPEADDATEIAGNIVYHAKYSPHFSPLKFGPEQALYATAESLRD
RLIQLWNETYVHFNKVDPKQTYYLSMEYLQGRALTNAIGNLNLQGPYADA
LRTLGYELEEIAEQEKDAALGNGGLGRLASCFLDSMATLNLPAWGYGLRY
RHGLFKQIITKKGQEEIPEDWLEKFSPWEIVRHDVVFPVRFFGKVQVNPD
GSRKWVDGDVVQALAYDVPIPGYGTKNTISLRLWEAKARAEDLDLFQFNE
GEYELAAQLHSRAQQICTVLYPGDATENGKLLRLKQQFFLCSASLQDIIS
RFHERSTTRKWSEFPSKVAVQMNDTHPTLAIPELMRLLMDDNGLGWDEAW
DVTSKTVAYTNHTVLPEALEKWSQSLMWKLLPRHMEIIEEIDKRFVQTIR
DTRVDLEDKISSLSILDNNPQKPVVRMANLCVVSSHTVNGVAQLHSDILK
AELFADYVSIWPNKFQNKTNGITPRRWLRFCSPELSDIITKWLKTDKWIT
DLDLLTGLRQFADNEELQSEWASAKTANKKRLAQYIERVTGVSIDPTSLF
DIQVKRIHEYKRQLMNILGVVYRFKKLKEMKPEERKKTVPRTVMIGGKAF
ATYTNAKRIVKLVNDVGDVVNSDPEVNEYLKVVFVPNYNVTVAEMLIPGS
ELSQHISTAGMEASGTSNMKFALNGCLIIGTLDGANVEIREEVGEENFFL
FGATADQVPRLRKEREDGLFKPDPRFEEAKQFVKSGVFGSYDYGPLLDSL
EGNTGFGRGDYFLVGYDFPSYMDAQAKVDEAYKDRKGWLKMSILSTAGSG
KFSSDRTIAQYAKEIWNIEACPVP
Ligand information
Ligand IDGLC
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6+/m1/s1
InChIKeyWQZGKKKJIJFFOK-DVKNGEFBSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C1C(C(C(C(O1)O)O)O)O)O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)O)O)O)O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
CACTVS 3.341OC[C@H]1O[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O
ACDLabs 10.04OC1C(O)C(OC(O)C1O)CO
FormulaC6 H12 O6
Namealpha-D-glucopyranose;
alpha-D-glucose;
D-glucose;
glucose
ChEMBLCHEMBL423707
DrugBank
ZINCZINC000003861213
PDB chain4bqi Chain C Residue 3 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4bqi Sugar-Coated Sensor Chip and Nanoparticle Surfaces for the in Vitro Enzymatic Synthesis of Starch-Like Materials
Resolution1.9 Å
Binding residue
(original residue number in PDB)		G215 G362 W363
Binding residue
(residue number reindexed from 1)		G201 G345 W346
Annotation score2
Enzymatic activity
Catalytic site (original residue number in PDB) H379 K572 R573 K578 T683 K687
Catalytic site (residue number reindexed from 1) H362 K555 R556 K561 T666 K670
Enzyme Commision number 2.4.1.1: glycogen phosphorylase.
Gene Ontology
Molecular Function
GO:0004645 1,4-alpha-oligoglucan phosphorylase activity
GO:0008184 glycogen phosphorylase activity
GO:0016757 glycosyltransferase activity
GO:0030170 pyridoxal phosphate binding
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0009414 response to water deprivation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0009507 chloroplast

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4bqi, PDBe:4bqi, PDBj:4bqi
PDBsum4bqi
PubMed
UniProtQ9SD76|PHS2_ARATH Alpha-glucan phosphorylase 2, cytosolic (Gene Name=PHS2)

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