Structure of PDB 4afk Chain A Binding Site BS02
Receptor Information
>4afk Chain A (length=430) Species:
208964
(Pseudomonas aeruginosa PAO1) [
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EAPKNFGLDVKITGESENDRDLGTAPGGTLNDIGIDLRPWAFGQWGDWSA
YFMGQAVAATDTIETDTLQSDTDGREPDKSYLAAREFWVDYAGLTAYPGE
HLRFGRQRLREDSGQWQDTNIEALNWSFETTLLNAHAGVAQRFSEYRTDL
DELAPEDKDRTHVFGDISTQWAPHHRIGVRIHHADDSGHLRRPGEEVDNL
DKTYTGQLTWLGIEATGDAYNYRSSMPLNYWASATWLTGDRDNLTTTTVD
DRRIATGKQSGDVNAFGVDLGLRWNIDEQWKAGVGYARGSGGGKDGEEQF
QQTGLESNRSNFTGTRSRVHRFGEAFRGELSNLQAATLFGSWQLREDYDA
SLVYHKFWRVDDDSDIGTSGINAALQPGEKDIGQELDLVVTKYFSALIRF
RGGLFKPGDAYGPGTDSTMHRAFVDFIWRF
Ligand information
Ligand ID
FLC
InChI
InChI=1S/C6H8O7/c7-3(8)1-6(13,5(11)12)2-4(9)10/h13H,1-2H2,(H,7,8)(H,9,10)(H,11,12)/p-3
InChIKey
KRKNYBCHXYNGOX-UHFFFAOYSA-K
SMILES
Software
SMILES
CACTVS 3.341
OC(CC([O-])=O)(CC([O-])=O)C([O-])=O
OpenEye OEToolkits 1.5.0
C(C(=O)[O-])C(CC(=O)[O-])(C(=O)[O-])O
ACDLabs 10.04
O=C([O-])CC(O)(C([O-])=O)CC(=O)[O-]
Formula
C6 H5 O7
Name
CITRATE ANION
ChEMBL
DrugBank
ZINC
PDB chain
4afk Chain A Residue 1491 [
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Receptor-Ligand Complex Structure
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PDB
4afk
A Conformational Landscape for Alginate Secretion Across the Outer Membrane of Pseudomonas Aeruginosa.
Resolution
1.897 Å
Binding residue
(original residue number in PDB)
R74 D102 T103 R152
Binding residue
(residue number reindexed from 1)
R38 D66 T67 R108
Annotation score
3
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Biological Process
GO:0042121
alginic acid biosynthetic process
Cellular Component
GO:0009279
cell outer membrane
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4afk
,
PDBe:4afk
,
PDBj:4afk
PDBsum
4afk
PubMed
25084326
UniProt
P18895
|ALGE_PSEAE Alginate production protein AlgE (Gene Name=algE)
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