Structure of PDB 3zei Chain A Binding Site BS02

Receptor Information
>3zei Chain A (length=300) Species: 1773 (Mycobacterium tuberculosis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MSIAEDITQLIGRTPLVRLRRVTDGAVADIVAKLEFFNPANSVKDRIGVA
MLQAAEQAGLIKPDTIILEPTSGNTGIALAMVCAARGYRCVLTMPETMSL
ERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPAN
PAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFV
AVEPAASPVLSGGQKGPHPIQGIGAGFVPPVLDQDLVDEIITVGNEDALN
VARRLAREEGLLVGISSGAATVAALQVARRPENAGKLIVVVLPDFGERYL
Ligand information
Ligand IDAWH
InChIInChI=1S/C20H16N2O6S/c1-22-18(25)16(10-12-5-2-3-8-15(12)28-11-17(23)24)29-20(22)21-14-7-4-6-13(9-14)19(26)27/h2-10H,11H2,1H3,(H,23,24)(H,26,27)/b16-10-,21-20-
InChIKeyZRWLYRDALGQUID-PTWQKYQPSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.9.2CN\1C(=O)/C(=C/c2ccccc2OCC(=O)O)/S/C1=N\c3cccc(c3)C(=O)O
CACTVS 3.385CN1C(=O)C(SC1=Nc2cccc(c2)C(O)=O)=Cc3ccccc3OCC(O)=O
OpenEye OEToolkits 1.9.2CN1C(=O)C(=Cc2ccccc2OCC(=O)O)SC1=Nc3cccc(c3)C(=O)O
CACTVS 3.385CN1C(=O)C(/SC1=Nc2cccc(c2)C(O)=O)=C/c3ccccc3OCC(O)=O
ACDLabs 12.01O=C(O)COc1ccccc1\C=C3/S/C(=N\c2cccc(C(=O)O)c2)N(C3=O)C
FormulaC20 H16 N2 O6 S
Name3-[(Z)-[(5Z)-5-[[2-(2-hydroxy-2-oxoethyloxy)phenyl]methylidene]-3-methyl-4-oxidanylidene-1,3-thiazolidin-2-ylidene]amino]benzoic acid;
3-((Z)-((Z)-5-(2(carboxymethoxy)benzylidene)-3-methyl-4-oxothiazolidin-2-ylidene)amino)benzoic acid
ChEMBLCHEMBL2418558
DrugBank
ZINC
PDB chain3zei Chain A Residue 1302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3zei Structure-Guided Design of Novel Thiazolidine Inhibitors of O-Acetyl Serine Sulfhydrylase from Mycobacterium Tuberculosis.
Resolution2.0 Å
Binding residue
(original residue number in PDB)
T71 S72 I126 Q144 F145 K215 G222 A225 F227
Binding residue
(residue number reindexed from 1)
T71 S72 I126 Q144 F145 K215 G222 A225 F227
Annotation score1
Binding affinityMOAD: ic50=0.103uM
BindingDB: IC50=103nM
Enzymatic activity
Catalytic site (original residue number in PDB) K44 S266 P293
Catalytic site (residue number reindexed from 1) K44 S266 P293
Enzyme Commision number 2.5.1.47: cysteine synthase.
Gene Ontology
Molecular Function
GO:0004124 cysteine synthase activity
GO:0005515 protein binding
GO:0016740 transferase activity
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0030170 pyridoxal phosphate binding
GO:0080146 L-cysteine desulfhydrase activity
Biological Process
GO:0006535 cysteine biosynthetic process from serine
GO:0019344 cysteine biosynthetic process
Cellular Component
GO:0005576 extracellular region
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:3zei, PDBe:3zei, PDBj:3zei
PDBsum3zei
PubMed23879381
UniProtP9WP55|CYSK_MYCTU O-acetylserine sulfhydrylase (Gene Name=cysK1)

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