Structure of PDB 3vxj Chain A Binding Site BS02
Receptor Information
>3vxj Chain A (length=438) Species:
5331
(Bjerkandera adusta) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ILPLNNIQGDILVGMKKQKERFVFFQVNDATSFKTALKTYVPERITSAAI
LISDPSQQPLAFVNLGFSNTGLQALGITDDLGDAQFPDGQFADAANLGDD
LSQWVAPFTGTTIHGVFLIGSDQDDFLDQFTDDISSTFGSSITQVQALSG
SARPGDQAGHEHFGFLDGISQPSVTGWETTVFPGQAVVPPGIILTGRDGD
TGTRPSWALDGSFMAFRHFQQKVPEFNAYTLANAIPANSAGNLTQQEGAE
FLGARMFGRWKSGAPIDLAPTADDPALGADPQRNNNFDYSDTLTDETRCP
FGAHVRKTNPRQDLGGPVDTFHAMRSSIPYGPETSDAELASGVTAQDRGL
LFVEYQSIIGNGFRFQQINWANNANFPFSKPITPGIEPIIGQTTPRTVGG
LDPLNQNETFTVPLFVIPKGGEYFFLPSISALTATIAA
Ligand information
Ligand ID
3DM
InChI
InChI=1S/C8H10O3/c1-10-6-4-3-5-7(11-2)8(6)9/h3-5,9H,1-2H3
InChIKey
KLIDCXVFHGNTTM-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
COc1cccc(c1O)OC
CACTVS 3.341
COc1cccc(OC)c1O
ACDLabs 10.04
O(c1cccc(OC)c1O)C
Formula
C8 H10 O3
Name
2,6-dimethoxyphenol
ChEMBL
CHEMBL109652
DrugBank
ZINC
ZINC000000154666
PDB chain
3vxj Chain A Residue 503 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3vxj
Dye-decolorizing peroxidase (DyP) complex with 2,6-dimethoxyphenol
Resolution
1.39 Å
Binding residue
(original residue number in PDB)
G188 N313 R315 H326
Binding residue
(residue number reindexed from 1)
G184 N309 R311 H322
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.11.1.19
: dye decolorizing peroxidase.
Gene Ontology
Molecular Function
GO:0004601
peroxidase activity
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0098869
cellular oxidant detoxification
Cellular Component
GO:0005829
cytosol
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3vxj
,
PDBe:3vxj
,
PDBj:3vxj
PDBsum
3vxj
PubMed
UniProt
Q8WZK8
[
Back to BioLiP
]