Structure of PDB 3ty9 Chain A Binding Site BS02

Receptor Information
>3ty9 Chain A (length=376) Species: 203119 (Acetivibrio thermocellus ATCC 27405) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SMSRFAADPHWLIYLPPTMSPCETSKKEGMLEHPIEAFEYFRTRGVGKVV
CEQKHMGSRAVVIVCKDSQVAEKRFGVLDGTAGICYTRTGRHFFDDMQLE
AELIDRVRKVLDKSGFWGDFNTDWVCLDCELMPWSAKAQKLLEEQYSAVG
ISGRVVLDEAVKLLKQASLNADINELLQRFTERSEMMQKYVEAYRKYCWP
VNSIDDLKLAPFHILATEGKVHSDKNHIWHMDTIAKYCTQDDSLIMATNH
ILVDVTDAESVDKGIKWWEDLTASGGEGMVVKPYDFIVKNELLQPAVKCR
GREYLRIIYGPEYTMDENIERLRNRAVGKKRSLALREFSLGMEALERFVR
NEPLYRVHECVFGVLALESEPVDPRL
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain3ty9 Chain A Residue 1000 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3ty9 The adenylyltransferase domain of bacterial Pnkp defines a unique RNA ligase family.
Resolution3.12 Å
Binding residue
(original residue number in PDB)		T731 I737
Binding residue
(residue number reindexed from 1)		T239 I245
Annotation score4
Enzymatic activity
Enzyme Commision number 6.5.1.3: RNA ligase (ATP).
External links