Structure of PDB 3tar Chain A Binding Site BS02

Receptor Information

>3tar Chain A (length=580) Species: 129337 (Geobacillus)

AKMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIAVVNEHGRFFL
RPETALADPQFVAWLGDETKKKSMFDSKRAAVALKWKGIELCGVSFDLLL
AAYLLDPAQGVDDVAAAAKMKQYEAVRPDEAVYGKGAKRAVPDEPVLAEH
LVRKAAAIWELERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVD
TKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGVILFEKLQLPV
LKKTKTGYSTSADVLEKLAPYHEIVENILHYRQLGKLQSTYIEGLLKVVR
PDTKKVHTIFNQALTQTGRLSSTEPNLQNIPIRLEEGRKIRQAFVPSESD
WLIFAADYSQIELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDE
VTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFIERYFESFPGV
KRYMENIVQEAKQKGYVTTLLHRRRYLPDITSRNFNVRSFAERMAMNTPI
QGSAADIIKKAMIDLNARLKEERLQAHLLLQVHDELILEAPKEEMERLCR
LVPEVMEQAVTLRVPLKVDYHYGSTWYDAK

Ligand information

>3tar Chain C (length=16)

gacgtacgtgatcgca

Receptor-Ligand Complex Structure

Structure summary

• PDB: 3tar Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis.
• Resolution: 1.6 Å
• Binding residue (original residue number in PDB): K434 N529 S530 K532 S585 T586 L610 T611 Q612 T613 R615 S617 S618 T619 E620 N622 Y714 R771 N793 Q797
• Binding residue (residue number reindexed from 1): K138 N233 S234 K236 S289 T290 L314 T315 Q316 T317 R319 S321 S322 T323 E324 N326 Y418 R475 N497 Q501

Gene Ontology

--> -->

UnboundLocalError

Python 3.6.8: /usr/bin/python3 Thu Apr 17 10:27:33 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()

   1435     title=pdb2title(pdbid)

   1436     if bs.startswith("BS"):

=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)

   1438     else:

   1439         if lig3:

pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '3tar', asym_id = 'A', bs = 'BS02', title = 'Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis.'

 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='3tar', asym_id='A', bs='BS02', title='Structural evidence for the rare tautomer hypothesis of spontaneous mutagenesis.')

   1295         display_ec(ec,csaOrig,csaRenu)

   1296     if go:

=> 1297         display_go(go,uniprot,pdbid,asym_id)

   1298     return pubmed,uniprot

   1299 

global display_go = <function display_go>, go = '0003676,0003677,0003887,0006139,0006260,0006261,0008408', uniprot = '', pdbid = '3tar', asym_id = 'A'

 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003676,0003677,0003887,0006139,0006260,0006261,0008408', uniprot='', pdbid='3tar', asym_id='A')

    480         '''.replace("$namespace_link",namespace_link

    481           ).replace("$namespace",namespace

=>  482           ).replace("$uniprot",u

    483         ))

    484         for l,(term,name) in enumerate(go2aspect[Aspect]):

u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>