Structure of PDB 3t1f Chain A Binding Site BS02

Receptor Information
>3t1f Chain A (length=263) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NYTFRCLQMSSFANRSWSRTDSVVWLGDLQTHRWSNDSATISFTKPWSQG
KLSNQQWEKLQHMFQVYRVSFTRDIQELVKMMDYPIEIQLSAGCEMASES
FLHVAFQGKYVVRFWGTSWQTVPGAPSWLDLPIKVLNADQGTSATVQMLL
NDTCPLFVRGLLEAGKSDLEKQEKPVAWLSSVPSHGHRQLVCHVSGFYPK
PVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGLACRVK
HSSLGGQDIILYW
Ligand information
Ligand IDGOL
InChIInChI=1S/C3H8O3/c4-1-3(6)2-5/h3-6H,1-2H2
InChIKeyPEDCQBHIVMGVHV-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.7.0C(C(CO)O)O
ACDLabs 12.01
CACTVS 3.370		OCC(O)CO
FormulaC3 H8 O3
NameGLYCEROL;
GLYCERIN;
PROPANE-1,2,3-TRIOL
ChEMBLCHEMBL692
DrugBankDB09462
ZINCZINC000000895048
PDB chain3t1f Chain A Residue 287 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3t1f Invariant natural killer T cells recognize glycolipids from pathogenic Gram-positive bacteria.
Resolution1.7 Å
Binding residue
(original residue number in PDB)		D34 E243 T244 W245
Binding residue
(residue number reindexed from 1)		D28 E227 T228 W229
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:3t1f, PDBe:3t1f, PDBj:3t1f
PDBsum3t1f
PubMed21892173
UniProtP11609|CD1D1_MOUSE Antigen-presenting glycoprotein CD1d1 (Gene Name=Cd1d1)

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