Structure of PDB 3rs6 Chain A Binding Site BS02

Receptor Information

>3rs6 Chain A (length=232) Species: 167618 (Dioclea virgata) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

ADTIVAVELDSYPNTDIGDPSYPHIGIDIKSVRSKSTARWNMQTGKVGTA
HISYNSVAKRLSAVVSYTGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLY
KETNTILSWSFTSKLKTANSLHFSFNQFSQNPKDLILQGDATTDSDGNLQ
LTRVSSDGSPQGSSVGRALFYAPVHIWEKSAVVASFDATFTFLIKSPDRD
PADGITFFIANTDTSIPSGSGGRLLGLFPDAN

Ligand information

Ligand ID

InChI

InChI=1S/Ca/q+2

InChIKey

BHPQYMZQTOCNFJ-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341	[Ca++]
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Ca+2]

Formula

Name

CALCIUM ION

PDB chain

3rs6 Chain A Residue 239 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	3rs6 Structure of Dioclea virgata lectin: Relations between carbohydrate binding site and nitric oxide production.
Resolution	1.8 Å
Binding residue (original residue number in PDB)	D10 Y12 N14 D19
Binding residue (residue number reindexed from 1)	D10 Y12 N14 D19
Annotation score	4

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0005537	D-mannose binding
GO:0030246	carbohydrate binding
GO:0046872	metal ion binding
GO:0090729	toxin activity

	Biological Process
GO:0008150	biological_process
GO:0035821	modulation of process of another organism

	Cellular Component
GO:0005575	cellular_component
GO:0005773	vacuole
GO:0033095	aleurone grain

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Molecular Function

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Biological Process

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Cellular Component

External links

PDB	RCSB:3rs6, PDBe:3rs6, PDBj:3rs6
PDBsum	3rs6
PubMed	22198239
UniProt	P58907\|LECA_DIOVI Lectin alpha chain

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