Structure of PDB 3rkq Chain A Binding Site BS02
Receptor Information
>3rkq Chain A (length=58) Species:
9606
(Homo sapiens) [
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GRRKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWF
QNRRYKSK
Ligand information
>3rkq Chain D (length=19) [
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tcaagaggcccccacttca
Receptor-Ligand Complex Structure
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PDB
3rkq
Crystal structure of the human NKX2.5 homeodomain in complex with DNA target.
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
Y162 R168 K183 Q187 R190 Y191
Binding residue
(residue number reindexed from 1)
Y26 R32 K47 Q51 R54 Y55
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0000981
DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003677
DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
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Molecular Function
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Biological Process
External links
PDB
RCSB:3rkq
,
PDBe:3rkq
,
PDBj:3rkq
PDBsum
3rkq
PubMed
22849347
UniProt
P52952
|NKX25_HUMAN Homeobox protein Nkx-2.5 (Gene Name=NKX2-5)
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