Structure of PDB 3qo6 Chain A Binding Site BS02

Receptor Information

>3qo6 Chain A (length=326) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

PKKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGF
VWDKQGHIVTNYHVIRGASDLRVTLADQTTFDAKVVGFDQDKDVAVLRID
APKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISS
AATGRPIQDVIQTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGV
GFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQLGVSGVLVLDA
PPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCK
VGDEVTVEVLRGDHKEKISVTLEPKP

Ligand information

>3qo6 Chain G (length=3) Species: 32644 (unidentified) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

AAA

Receptor-Ligand Complex Structure

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Structure summary

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PDB	3qo6 Structural adaptation of the plant protease Deg1 to repair photosystem II during light exposure.
Resolution	2.5 Å
Binding residue (original residue number in PDB)	I336 L337 I339 F341 Y403
Binding residue (residue number reindexed from 1)	I226 L227 I229 F231 Y293

Enzymatic activity

Enzyme Commision number

3.4.21.-

Gene Ontology

	Molecular Function
GO:0004252	serine-type endopeptidase activity

	Biological Process
GO:0006508	proteolysis

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Molecular Function

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Biological Process

External links

PDB	RCSB:3qo6, PDBe:3qo6, PDBj:3qo6
PDBsum	3qo6
PubMed	21532594
UniProt	O22609\|DEGP1_ARATH Protease Do-like 1, chloroplastic (Gene Name=DEGP1)

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