Structure of PDB 3q0d Chain A Binding Site BS02
Receptor Information
>3q0d Chain A (length=145) Species:
3702
(Arabidopsis thaliana) [
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QIIGTVPGVEVGDEFQYRMELNLLGIHRPSQSGIDYMKDGELVATSIVSS
GGYNDVLDNSDVLIYTGQGGNVEPPKDQQLVTGNLALKNSINKKNPVRVI
RGIKKNYVYDGLYLVEEYWEETGSHGKLVFKFKLRRIPGQPELPW
Ligand information
>3q0d Chain C (length=10) [
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ctgacgtgga
Receptor-Ligand Complex Structure
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PDB
3q0d
A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo.
Resolution
2.3704 Å
Binding residue
(original residue number in PDB)
N383 R389 S391 Q392 Y397
Binding residue
(residue number reindexed from 1)
N22 R28 S30 Q31 Y36
Binding affinity
PDBbind-CN
: Kd=5uM
Enzymatic activity
Enzyme Commision number
2.1.1.-
2.1.1.367
: [histone H3]-lysine(9) N-methyltransferase.
External links
PDB
RCSB:3q0d
,
PDBe:3q0d
,
PDBj:3q0d
PDBsum
3q0d
PubMed
21245167
UniProt
O82175
|SUVH5_ARATH Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 (Gene Name=SUVH5)
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