Structure of PDB 3n9q Chain A Binding Site BS02

Receptor Information

>3n9q Chain A (length=484) Species: 6239 (Caenorhabditis elegans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

PKESDRCGGCGKFTHEDKKNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYE
KFFCPKCVPHTGHSIRYKVVAPHRYRWYSPNEKHLGIEVGSKTWIEDFIT
RENTVPSPTDDEVCIVEDGYEFRREFEKLGGADNWGKVFMVKDMDGLNMT
MPKPGFDLEDVVKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTKNRP
LLYNFLSLEFSDNNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIKLLQR
EEYLPEDQRPKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIA
APTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWIH
AVLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRSEEKFYFPNFE
LLHWMYMRNVLLEKITEANQEGSDMREQEKNIWTASQIMKAEMERWMDRE
LRLGPEILPTDDKNKIMISVRKQIEIQTKIQNAK

Ligand information

>3n9q Chain C (length=8) Species: 6239 (Caenorhabditis elegans) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

KAARKSAP

Receptor-Ligand Complex Structure

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Structure summary

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PDB	3n9q Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
Resolution	2.3 Å
Binding residue (original residue number in PDB)	Q260 I391 Q396 S397 T398 S424 F482 E531 N581 E608 K610 F611
Binding residue (residue number reindexed from 1)	Q43 I174 Q179 S180 T181 S207 F265 E314 N364 E391 K393 F394

Enzymatic activity

Enzyme Commision number

1.14.11.-

External links

PDB	RCSB:3n9q, PDBe:3n9q, PDBj:3n9q
PDBsum	3n9q
PubMed	20567261
UniProt	Q9GYI0\|KDM7_CAEEL Lysine-specific demethylase 7 homolog (Gene Name=jmjd-1.2)

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