Structure of PDB 3n9p Chain A Binding Site BS02

Receptor Information
>3n9p Chain A (length=487) Species: 6239 (Caenorhabditis elegans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PKESDRCGGCGKFTHEDKKNDFQWIGCDSCQTWYHFLCSGLEQFEYYLYE
KFFCPKCVPHTGHSIRYKVVAPHRYRWYSPNEKHLGIEVGSKTWIEDFIT
RENTVPSPTDDEVCIVEDGYEFRREFEKLGGADNWGKVFMVKDMDGLNMT
MPKPGFDLEDVVKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDTKNRP
LLYNFLSLEFSDNNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIKLLQR
EEYLPEDQRPKVEQFCLAGMAGSYTDFHVDFGGSSVYYHILKGEKIFYIA
APTEQNFAAYQAHETSPDTTTWFGDIANGAVKRVVIKEGQTLLIPAGWIH
AVLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRSEEKFYFPNFE
LLHWMYMRNVLLEKITEANQEGSDMREQEKNIWTASQIMKAEMERWMDRE
LRLGPEKNAILPTDDKNKIMISVRKQIEIQTKIQNAK
Ligand information
>3n9p Chain C (length=10) Species: 6239 (Caenorhabditis elegans) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
KAARKSAPAS
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB3n9p Structural insights into a dual-specificity histone demethylase ceKDM7A from Caenorhabditis elegans
Resolution2.388 Å
Binding residue
(original residue number in PDB)
Y292 D389 N395 Q396 S397 T398 S424 H495 D497 E531 N581 K610 F611 P614 N615
Binding residue
(residue number reindexed from 1)
Y75 D172 N178 Q179 S180 T181 S207 H278 D280 E314 N364 K393 F394 P397 N398
Enzymatic activity
Enzyme Commision number 1.14.11.-
External links
PDB RCSB:3n9p, PDBe:3n9p, PDBj:3n9p
PDBsum3n9p
PubMed20567261
UniProtQ9GYI0|KDM7_CAEEL Lysine-specific demethylase 7 homolog (Gene Name=jmjd-1.2)

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