Structure of PDB 3ltb Chain A Binding Site BS02
Receptor Information
>3ltb Chain A (length=69) Species:
32630
(synthetic construct) [
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DDDDKKTNWLKRIYRVRPCVKCKVAPRDWKVKNKHLRIYNMCKTCFNNSI
DIGDDTYHGHVDWLMYADS
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
3ltb Chain A Residue 81 [
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Receptor-Ligand Complex Structure
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PDB
3ltb
Three-dimensional structures reveal multiple ADP/ATP binding modes for a synthetic class of artificial proteins.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
K34 K36 R41 Y43 M45 F50 H62 G63 H64
Binding residue
(residue number reindexed from 1)
K30 K32 R37 Y39 M41 F46 H58 G59 H60
Annotation score
4
External links
PDB
RCSB:3ltb
,
PDBe:3ltb
,
PDBj:3ltb
PDBsum
3ltb
PubMed
20822107
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