Structure of PDB 3lb3 Chain A Binding Site BS02
Receptor Information
>3lb3 Chain A (length=137) Species:
129555
(Amphitrite ornata) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GFKQDIATIRGDLRTYAQDIFLAFLNKYPDERRYFKNYVGKSDQELKSMA
KFGDHTEKVFNLMMEVADRATDCVPLASDANTLVQMKQHSSLTTGNFEKL
FVALVEYMRASGQSFDSQSWDRFGKNLVSALSSAGMK
Ligand information
Ligand ID
4CH
InChI
InChI=1S/C6H5ClO/c7-5-1-3-6(8)4-2-5/h1-4,8H
InChIKey
WXNZTHHGJRFXKQ-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(ccc1O)Cl
CACTVS 3.341
Oc1ccc(Cl)cc1
ACDLabs 10.04
Clc1ccc(O)cc1
Formula
C6 H5 Cl O
Name
4-chlorophenol
ChEMBL
CHEMBL57053
DrugBank
DB13154
ZINC
ZINC000000001885
PDB chain
3lb3 Chain A Residue 191 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3lb3
Internal binding of halogenated phenols in dehaloperoxidase-hemoglobin inhibits peroxidase function.
Resolution
1.85 Å
Binding residue
(original residue number in PDB)
F21 F35 Y38 H55 T56 V59
Binding residue
(residue number reindexed from 1)
F21 F35 Y38 H55 T56 V59
Annotation score
1
Binding affinity
MOAD
: Kd=1.78mM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004601
peroxidase activity
GO:0005344
oxygen carrier activity
GO:0019825
oxygen binding
GO:0020037
heme binding
GO:0046872
metal ion binding
Biological Process
GO:0015671
oxygen transport
GO:0098869
cellular oxidant detoxification
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3lb3
,
PDBe:3lb3
,
PDBj:3lb3
PDBsum
3lb3
PubMed
20816071
UniProt
Q9NAV8
[
Back to BioLiP
]