Structure of PDB 3gnb Chain A Binding Site BS02

Receptor Information
>3gnb Chain A (length=68) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GGRPRQHLLSLTRRAQKHRLRELKIQVKEFADKEEGGDVKAVCLTLFLLA
LRARNEHRQADELEAIMQ
Ligand information
Receptor-Ligand Complex Structure
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PDB3gnb Structure of the RAG1 nonamer binding domain with DNA reveals a dimer that mediates DNA synapsis.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		G390 R391 R393 Q394 L399 T400 R402 A403 R407
Binding residue
(residue number reindexed from 1)		G2 R3 R5 Q6 L11 T12 R14 A15 R19
Enzymatic activity
Enzyme Commision number 2.3.2.27: RING-type E3 ubiquitin transferase.
3.1.-.-
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
GO:0043565 sequence-specific DNA binding
GO:0061630 ubiquitin protein ligase activity
Biological Process
GO:0033151 V(D)J recombination

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Molecular Function
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Biological Process
External links
PDB RCSB:3gnb, PDBe:3gnb, PDBj:3gnb
PDBsum3gnb
PubMed19396172
UniProtP15919|RAG1_MOUSE V(D)J recombination-activating protein 1 (Gene Name=Rag1)

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