Structure of PDB 3d7w Chain A Binding Site BS02

Receptor Information
>3d7w Chain A (length=249) Species: 3972 (Viscum album) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
YERLRLRTDQQTTGEEYFSFITLLRDYVSSGSFSNNIPLLRQSTVPVSEG
QRFVLVELTNAGGDTITAAIDVTNLYVVAYEAGNQSYFLSDAPAGAETQD
FSGTTSSSQPFNGSYPDLERYAGHRDQIPLGIDQLIQSVTALRFPGGQTK
TQARSILILIQMISEAARFNPILWRARQYINSGASFLPDVYMLELETSWG
QQSTQVQHSTDGVFNNPIALAIAPGVIVTLTNIRDVIASLAIMLFVCGE
Ligand information
Ligand IDZEZ
InChIInChI=1S/C10H13N5O/c1-7(4-16)2-3-11-9-8-10(13-5-12-8)15-6-14-9/h2,5-6,16H,3-4H2,1H3,(H2,11,12,13,14,15)/b7-2-
InChIKeyUZKQTCBAMSWPJD-UQCOIBPSSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0CC(=CCNc1c2c([nH]cn2)ncn1)CO
ACDLabs 10.04n2c1c(ncn1)c(nc2)NC/C=C(/C)CO
CACTVS 3.341CC(CO)=CCNc1ncnc2[nH]cnc12
CACTVS 3.341C\C(CO)=C\CNc1ncnc2[nH]cnc12
OpenEye OEToolkits 1.5.0C/C(=C/CNc1c2c([nH]cn2)ncn1)/CO
FormulaC10 H13 N5 O
Name(2Z)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol;
CIS-ZEATIN
ChEMBL
DrugBank
ZINCZINC000013523718
PDB chain3d7w Chain B Residue 702 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3d7w Structure of mistletoe lectin I from Viscum album in complex with the phytohormone zeatin
Resolution2.49 Å
Binding residue
(original residue number in PDB)
R234 D235
Binding residue
(residue number reindexed from 1)
R234 D235
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) V77 E165 R168
Catalytic site (residue number reindexed from 1) V77 E165 R168
Enzyme Commision number 3.2.2.22: rRNA N-glycosylase.
Gene Ontology
Molecular Function
GO:0030598 rRNA N-glycosylase activity
Biological Process
GO:0017148 negative regulation of translation

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Molecular Function

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Biological Process
External links
PDB RCSB:3d7w, PDBe:3d7w, PDBj:3d7w
PDBsum3d7w
PubMed18718563
UniProtP81446|ML1_VISAL Beta-galactoside-specific lectin 1

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