Structure of PDB 3bk7 Chain A Binding Site BS02

Receptor Information
>3bk7 Chain A (length=593) Species: 29292 (Pyrococcus abyssi) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MVRKMRIAVIDYDKCNPDKCGHFLCERVCPVNRMGGEAIIIDEENYKPII
QEASCTGCGICVHKCPFNAISIVNLPEQLDEDCVHRYGVNAFVLYRLPIV
KDGMVVGIVGPNGTGKTTAVKILAGQLIPNLCEDNDSWDNVIRAFRGNEL
QNYFERLKNGEIRPVVKPQYVDLLPKAVKGKVRELLKKVDEVGKFEEVVK
ELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQR
LKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGEPGVYGIFSKP
KGTRNGINEFLQGYLKDENVRFRPYEIRFTKLSERVDVERETLVEYPRLV
KDYGSFKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVE
WDLTVAYKPQYIKAEYEGTVYELLSKIDSSKLNSNFYKTELLKPLGIIDL
YDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAI
RHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGRALPPMGMREG
MNRFLASVGITFRRDPDSGRPRANKEGSVKDREQKARGEYYYA
Ligand information
Ligand IDSF4
InChIInChI=1S/4Fe.4S
InChIKeyLJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
FormulaFe4 S4
NameIRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain3bk7 Chain A Residue 597 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3bk7 X-ray Structure of the Complete ABC Enzyme ABCE1 from Pyrococcus abyssi
Resolution2.8 Å
Binding residue
(original residue number in PDB)		C15 N16 C20 C25 C65 I70
Binding residue
(residue number reindexed from 1)		C15 N16 C20 C25 C65 I70
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0005524 ATP binding
GO:0016491 oxidoreductase activity
GO:0016887 ATP hydrolysis activity
GO:0043024 ribosomal small subunit binding
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0006413 translational initiation
GO:0006415 translational termination

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Molecular Function
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Biological Process
External links
PDB RCSB:3bk7, PDBe:3bk7, PDBj:3bk7
PDBsum3bk7
PubMed18160405
UniProtQ9UZA4

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