Structure of PDB 2zuy Chain A Binding Site BS02

Receptor Information
>2zuy Chain A (length=604) Species: 1423 (Bacillus subtilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PKKRQMEYLTRGLIAVQTEQGVFVSWRFLGTDHETTAFHLYRDGKRITRD
PIAESTNFLDQNGTADSVYQVAAVNKGREEKLSKKARVWQENVLEVPLAK
PEGGVTPDGKPYTYSANDASVGDIDGDGEYEMILKWDPSNSKDNAHDGYT
GEVLIDAYKLDGTFLWRINLGRNIRAGAHYTQFMVYDLDGDGKAEIAMKT
ADGTTDGKGHIIGDEQADFRNEQGRILSGPEYLTVFKGETGEALTTVEYE
PPRGKLEDWGDGYGNRMDRFLAGTAYLDGERPSLVMARGYYTRTVLVAYD
FRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYGAMAV
DHDGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDA
GTGEILWGVHAGTDVGRGMAAHIDPSYKGSLVWGIDPPGNDGMSYGLFTS
KGEKISDKAPSSANFAIWWDGDLVRELLDHDWDGTIGRPKIEKWDAENGC
LKTIFQPAGVLSNNGTKGNPVLQANLFGDWREEVIWRTEDSSALRIYTTT
HLTRHCFYTLMHDPVYRLGIAWQNTAYNQPPHTSFYLGTGMKKPPKPALY
IAGS
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain2zuy Chain A Residue 622 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2zuy Structural determinants responsible for substrate recognition and mode of action in family 11 polysaccharide lyases
Resolution1.65 Å
Binding residue
(original residue number in PDB)		D472 D474 V476 E478
Binding residue
(residue number reindexed from 1)		D470 D472 V474 E476
Annotation score4
Enzymatic activity
Enzyme Commision number 4.2.2.24: rhamnogalacturonan exolyase.
Gene Ontology
Molecular Function
GO:0016829 lyase activity
GO:0046872 metal ion binding
Biological Process
GO:0071555 cell wall organization
Cellular Component
GO:0005576 extracellular region

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2zuy, PDBe:2zuy, PDBj:2zuy
PDBsum2zuy
PubMed19193638
UniProtO31527|YESX_BACSU Rhamnogalacturonan exolyase YesX (Gene Name=yesX)

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