Structure of PDB 2zsf Chain A Binding Site BS02
Receptor Information
>2zsf Chain A (length=307) Species:
1773
(Mycobacterium tuberculosis) [
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EPSPYVEFDRRQWRALRMSTPLALTEEELVGLRGLGEQIDLLEVEEVYLP
LARLIHLQVAARQRLFAATAEFLGEPQQNPDRPVPFIIGVAGSVAVGKST
TARVLQALLARWDHHPRVDLVTTDGFLYPNAELQRRNLMHRKGFPESYNR
RALMRFVTSVKSGSDYACAPVYSHLHYDIIPGAEQVVRHPDILILEGLNV
LQTGPTLMVSDLFDFSLYVDARIEDIEQWYVSRFLAMRTTAFADPESHFH
HYAAFSDSQAVVAAREIWRTINRPNLVENILPTRPRATLVLRKDADHSIN
RLRLRKL
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
2zsf Chain A Residue 652 [
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Receptor-Ligand Complex Structure
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PDB
2zsf
Mycobacterium tuberculosis pantothenate kinase: possible changes in location of ligands during enzyme action
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
V99 A100 G102 K103 S104 H179 R238 M242
Binding residue
(residue number reindexed from 1)
V94 A95 G97 K98 S99 H174 R233 M237
Annotation score
5
Enzymatic activity
Enzyme Commision number
2.7.1.33
: pantothenate kinase.
Gene Ontology
Molecular Function
GO:0004594
pantothenate kinase activity
GO:0005515
protein binding
GO:0005524
ATP binding
GO:0016301
kinase activity
Biological Process
GO:0015937
coenzyme A biosynthetic process
GO:0016310
phosphorylation
Cellular Component
GO:0005737
cytoplasm
GO:0005886
plasma membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:2zsf
,
PDBe:2zsf
,
PDBj:2zsf
PDBsum
2zsf
PubMed
19307712
UniProt
P9WPA7
|COAA_MYCTU Pantothenate kinase (Gene Name=coaA)
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