Structure of PDB 2y0k Chain A Binding Site BS02

Receptor Information
>2y0k Chain A (length=364) Species: 208964 (Pseudomonas aeruginosa PAO1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HHHHDLVEDSHASLELRNFYFNRDFRGARDNADEWAQGFLLRLESGFSEG
TVGFGVDAIGLLGFKLDQDDYAKLGLTAKARVSNSLLKVGALHFKSPLVS
ANDTRLLPELFRGALLDVQEIDGLTLRGAHLDRNKLNSSSDYQVFSANRI
GGRSDAFDFAGGDYRLTPALTASLHQGRLKDIYRQTFAGLVHTLDLGRSL
KSDLRFARASEDGGFRELDNRAFGALFSLRLGAHAVAAGYQRISGDDPYP
YIAGSDPYLVNFIQIGDFGNVDERSWQLRYDYDFGALGLPGLSFMSRYVS
GDNVARGAANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVRSNFANDL
DENRLILSYSLALW
Ligand information
Ligand IDC8E
InChIInChI=1S/C16H34O5/c1-2-3-4-5-6-7-9-18-11-13-20-15-16-21-14-12-19-10-8-17/h17H,2-16H2,1H3
InChIKeyFEOZZFHAVXYAMB-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04O(CCCCCCCC)CCOCCOCCOCCO
CACTVS 3.341
OpenEye OEToolkits 1.5.0		CCCCCCCCOCCOCCOCCOCCO
FormulaC16 H34 O5
Name(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE
ChEMBL
DrugBankDB04233
ZINCZINC000014881140
PDB chain2y0k Chain A Residue 1390 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2y0k Crystal Structure of Pseudomonas Aeruginosa Opdo
Resolution2.295 Å
Binding residue
(original residue number in PDB)		L298 S316 Y318
Binding residue
(residue number reindexed from 1)		L278 S296 Y298
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0055085 transmembrane transport
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:2y0k, PDBe:2y0k, PDBj:2y0k
PDBsum2y0k
PubMed
UniProtQ9I202

[Back to BioLiP]