Structure of PDB 2voa Chain A Binding Site BS02
Receptor Information
>2voa Chain A (length=257) Species:
2234
(Archaeoglobus fulgidus) [
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MLKIATFNVNSIRSRLHIVIPWLKENKPDILCMQETKVENRKFPEADFHR
IGYHVVFSGSKGRNGVAIASLEEPEDVSFGLDSEPKDEDRLIRAKIAGID
VINTYVPQGFKIDSEKYQYKLQWLERLYHYLQKTVDFRSFAVWCGDMNVA
PEPIDVHSPDKLKNHVCFHEDARRAYKKILELGFVDVLRKIHPNERIYTF
YDYRVKGAIERGLGWRGDAILATPPLAERCVDCYADIKPRLAEKPSDHLP
LVAVFDV
Ligand information
>2voa Chain D (length=10) [
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cggctaccgc
Receptor-Ligand Complex Structure
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PDB
2voa
Structure and Function of the Abasic Site Specificity Pocket of an Ap Endonuclease from Archaeoglobus Fulgidus.
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
Q108 R204
Binding residue
(residue number reindexed from 1)
Q108 R204
Enzymatic activity
Catalytic site (original residue number in PDB)
N8 N10 E35 Y105 D146 N148 D218 D247 H248
Catalytic site (residue number reindexed from 1)
N8 N10 E35 Y105 D146 N148 D218 D247 H248
Enzyme Commision number
4.2.99.18
: DNA-(apurinic or apyrimidinic site) lyase.
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003824
catalytic activity
GO:0004518
nuclease activity
GO:0004519
endonuclease activity
GO:0008311
double-stranded DNA 3'-5' DNA exonuclease activity
GO:0046872
metal ion binding
Biological Process
GO:0006281
DNA repair
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Molecular Function
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Biological Process
External links
PDB
RCSB:2voa
,
PDBe:2voa
,
PDBj:2voa
PDBsum
2voa
PubMed
19015049
UniProt
O29675
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