Structure of PDB 2vly Chain A Binding Site BS02

Receptor Information

>2vly Chain A (length=153) Species: 9796 (Equus caballus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

GLSDGEWQQVLNVWGKVEADIAGHGQEVLIRLFTGHPETLEKFDKFKHLK
TEAEMKASEDLKKHGTVVLTALGGILKKKGHHEAELKPLAQSHATKHKIP
IKYLEFISDAIIHVLHSKHPGDFGADAQGAMTKALELFRNDIAAKYKELG
FQG

Ligand information

InChI=1S/O2/c1-2

MYMOFIZGZYHOMD-UHFFFAOYSA-N

SMILES

Software	SMILES
CACTVS 3.341 OpenEye OEToolkits 1.5.0	O=O

Formula

Name

OXYGEN MOLECULE

PDB chain

2vly Chain A Residue 1155 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

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Structure summary

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PDB	2vly The Crystal Structure of Peroxymyoglobin Generated Through Cryoradiolytic Reduction of Myoglobin Compound III During Data Collection.
Resolution	1.6 Å
Binding residue (original residue number in PDB)	F43 H64 V68
Binding residue (residue number reindexed from 1)	F43 H64 V68
Annotation score	1

Enzymatic activity

Enzyme Commision number

1.11.1.-
1.7.-.-

Gene Ontology

	Molecular Function
GO:0004601	peroxidase activity
GO:0005344	oxygen carrier activity
GO:0016491	oxidoreductase activity
GO:0019825	oxygen binding
GO:0020037	heme binding
GO:0046872	metal ion binding
GO:0098809	nitrite reductase activity

	Biological Process
GO:0015671	oxygen transport
GO:0019430	removal of superoxide radicals

	Cellular Component
GO:0005737	cytoplasm
GO:0016528	sarcoplasm

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Cellular Component

External links

PDB	RCSB:2vly, PDBe:2vly, PDBj:2vly
PDBsum	2vly
PubMed	18215120
UniProt	P68082\|MYG_HORSE Myoglobin (Gene Name=MB)

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