Structure of PDB 2ofi Chain A Binding Site BS02
Receptor Information
>2ofi Chain A (length=184) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MQRCDWVSQDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLSWITVL
KKRENYRACFHQFDPIRIAAMQEEDVERLLQNTGIIRHRGKIQAIISNAR
AWLAMEQNGESFADFVWSFVDGQPQITQAASLDKIPTSTPASDALAKALK
KRGFKFVGTTICYSFMQACGLVNDHITGCFCHPG
Ligand information
>2ofi Chain B (length=12) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cggactcacggg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2ofi
DNA damage recognition and repair by 3-methyladenine DNA glycosylase I (TAG).
Resolution
1.85 Å
Binding residue
(original residue number in PDB)
Q41 A42 G43 L44 F156 G158 T160 I161
Binding residue
(residue number reindexed from 1)
Q41 A42 G43 L44 F156 G158 T160 I161
Enzymatic activity
Enzyme Commision number
3.2.2.20
: DNA-3-methyladenine glycosylase I.
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0008725
DNA-3-methyladenine glycosylase activity
GO:0016798
hydrolase activity, acting on glycosyl bonds
GO:0046872
metal ion binding
Biological Process
GO:0006281
DNA repair
GO:0006284
base-excision repair
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2ofi
,
PDBe:2ofi
,
PDBj:2ofi
PDBsum
2ofi
PubMed
17410210
UniProt
Q8Z2A5
[
Back to BioLiP
]