Structure of PDB 2ml3 Chain A Binding Site BS02

Receptor Information
>2ml3 Chain A (length=181) Species: 354 (Azotobacter vinelandii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ADPGVEGTPVVGSDLDDELHGTLGSEQILGGGGADQLYGYAGNDLLDGGA
GRDKLSGGEGADTFRFALREDSHRSPLGTFGDRILDFDPSQDRIDVSALG
FSGLGNGYAGSLAVSVSDDGTRTYLKSYEADAQGLSFEVALEGDHAAALS
ADNIVFAATDAAAAGELGVIGASGQPDDPTV
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain2ml3 Chain A Residue 202 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2ml3 Structural and Functional Characterization of the R-modules in Alginate C-5 Epimerases AlgE4 and AlgE6 from Azotobacter vinelandii
ResolutionN/A
Binding residue
(original residue number in PDB)		T22 G24 E26 G39 A41 D44
Binding residue
(residue number reindexed from 1)		T22 G24 E26 G39 A41 D44
Annotation score1
Enzymatic activity
Enzyme Commision number 5.1.3.37: mannuronan 5-epimerase.
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Cellular Component
GO:0005615 extracellular space

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:2ml3, PDBe:2ml3, PDBj:2ml3
PDBsum2ml3
PubMed25266718
UniProtQ9ZFH0|ALGE6_AZOVI Mannuronan C5-epimerase AlgE6 (Gene Name=algE6)

[Back to BioLiP]