Structure of PDB 2io7 Chain A Binding Site BS02

Receptor Information
>2io7 Chain A (length=587) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
APFGTLLGYAPGGVAIYSSDYRSYIDDEYMGHKWQCVEFARRFLFLNYGV
VFTDVGMAWEIFSLRFLREVVNDNILPLQAFPNGSPRAPVAGALLIWDKG
GEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQWTRELEMVVENGC
YTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLENKGQFD
GKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLM
YLHATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDE
RGLKVYEYNADSASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAW
KHSRARPFVHIMQDKDIEENYHAQFMEQALHQAGFETRILRGLDELGWDA
AGQLIDGEGRLVNCVWKTWAWETAFDQIREFAAVPIRTGHPQNEVRLIDV
LLRPEVLVFEPLWTVIPGNKAILPILWSLFPHHRYLLDTDFTVNDELVKT
GYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNIYQQLWCLPKVDG
KYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLI
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain2io7 Chain A Residue 5002 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2io7 Dual binding sites for translocation catalysis by Escherichia coli glutathionylspermidine synthetase
Resolution2.7 Å
Binding residue
(original residue number in PDB)
D318 E330
Binding residue
(residue number reindexed from 1)
D295 E307
Annotation score1
Enzymatic activity
Enzyme Commision number 3.5.1.78: glutathionylspermidine amidase.
6.3.1.8: glutathionylspermidine synthase.
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0008884 glutathionylspermidine amidase activity
GO:0008885 glutathionylspermidine synthase activity
GO:0016787 hydrolase activity
GO:0016874 ligase activity
GO:0046872 metal ion binding
Biological Process
GO:0006749 glutathione metabolic process
GO:0008216 spermidine metabolic process
Cellular Component
GO:0005829 cytosol

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:2io7, PDBe:2io7, PDBj:2io7
PDBsum2io7
PubMed17124497
UniProtP0AES0|GSP_ECOLI Bifunctional glutathionylspermidine synthetase/amidase (Gene Name=gss)

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