Structure of PDB 2evg Chain A Binding Site BS02
Receptor Information
>2evg Chain A (length=290) Species:
4932
(Saccharomyces cerevisiae) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
VILTQLNEDGTTSNYFDKRKLKIAPRSTLQFKVGPPFELVRDYCPVVESH
TGRTLDLRIIPRIDRGFDHIDEEWVGYKRNYFTLVSTFETANCDLDTFLK
SSFDLLVGRLRVQYFAIKIKAKNDDDDTEINLVQHTAKRDKGPQFCPSVC
PLVPSPLPKHQTIREASNVRNITKMKKYDSTFYLHRDHVNYEEYGVDSLL
FSYPEDSIQKVARYERVQFASSISVKKPSQQNKHFSLHVILGAVVDPDGI
PYDELALKNGSKGMFVYLQEMKTPPLIIRGRSPSNYASSQ
Ligand information
>2evg Chain C (length=14) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
agtttatgtgtcgc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
2evg
Principles of Protein-DNA Recognition Revealed in the Structural Analysis of Ndt80-MSE DNA Complexes.
Resolution
1.55 Å
Binding residue
(original residue number in PDB)
K50 K54 P57 R58 R97 R111 N112 Y113 A175 K176 R177 N206 R254 Y331 S333
Binding residue
(residue number reindexed from 1)
K18 K22 P25 R26 R65 R79 N80 Y81 A137 K138 R139 N168 R216 Y286 S288
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:2evg
,
PDBe:2evg
,
PDBj:2evg
PDBsum
2evg
PubMed
16531239
UniProt
P38830
|NDT80_YEAST Meiosis-specific transcription factor NDT80 (Gene Name=NDT80)
[
Back to BioLiP
]