Structure of PDB 2duq Chain A Binding Site BS02

Receptor Information
>2duq Chain A (length=244) Species: 9615 (Canis lupus familiaris) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
HLKREHSLIKPYQGVGSSSMPLWDFQGSTILTSQYVRLTPDERSKEGSIW
NHQPCFLKDWEMHVHFKVHGTGKKNLHGDGIALWYTRDRLVPGPVFGSKD
NFHGLAIFLDTYPNDETTERVFPYISVMVNNGSLSYDHSKDGRWTELAGC
TADFRNRDHDTFLAVRYSRGRLTVMTDLEDKNEWKNCIDITGVRLPTGYY
FGASAGTGDLSDNHDIISMKLFQLMVEHTIDWTKIEPSVNFLKS
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain2duq Chain A Residue 1 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB2duq Structural basis for recognition of high mannose type glycoproteins by mammalian transport lectin VIP36
Resolution1.8 Å
Binding residue
(original residue number in PDB)		D162 Y164 N166 D193
Binding residue
(residue number reindexed from 1)		D110 Y112 N114 D141
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:2duq, PDBe:2duq, PDBj:2duq
PDBsum2duq
PubMed17652092
UniProtP49256|LMAN2_CANLF Vesicular integral-membrane protein VIP36 (Gene Name=LMAN2)

[Back to BioLiP]