Structure of PDB 2dp8 Chain A Binding Site BS02
Receptor Information
>2dp8 Chain A (length=341) Species:
9913
(Bos taurus) [
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YTRVVWCAVGPEEQKKCQQWSQQSGQNVTCATASTTDDCIVLVLKGEADA
LNLDGGYIYTAGKCGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKK
ANEGLTWNSLKDKKSCHTAVDRTAGWNIPMGLIVNQTGSCAFDEFFSQSC
APGADPKSRLCALCAGDDQGLDKCVPNSKEKYYGYTGAFRCLAEDVGDVA
FVKNDTVWENTNGESTADWAKNLKREDFRLLCLDGTRKPVTEAQSCHLAV
APNHAVVSRSDRAAHVEQVLLHQQALFGKNGKNCPDKFCLFKSETKNLLF
NDNTECLAKLGGRPTYEEYLGTEYVTAIANLKKCSLEACAF
Ligand information
Ligand ID
CO3
InChI
InChI=1S/CH2O3/c2-1(3)4/h(H2,2,3,4)/p-2
InChIKey
BVKZGUZCCUSVTD-UHFFFAOYSA-L
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
C(=O)([O-])[O-]
ACDLabs 10.04
CACTVS 3.341
[O-]C([O-])=O
Formula
C O3
Name
CARBONATE ION
ChEMBL
DrugBank
DB14531
ZINC
PDB chain
2dp8 Chain A Residue 691 [
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Receptor-Ligand Complex Structure
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PDB
2dp8
Carbohydrate recognition by lactoferrin: Crystal structure of the complex of C-terminal lobe of bovine lactoferrin with trisaccharide at 2.5 A resolution
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
D395 Y433 T459 R463 A465 Y526 H595
Binding residue
(residue number reindexed from 1)
D54 Y92 T118 R122 A124 Y185 H254
Annotation score
3
Enzymatic activity
Enzyme Commision number
3.4.21.-
Gene Ontology
Cellular Component
GO:0005576
extracellular region
View graph for
Cellular Component
External links
PDB
RCSB:2dp8
,
PDBe:2dp8
,
PDBj:2dp8
PDBsum
2dp8
PubMed
UniProt
P24627
|TRFL_BOVIN Lactotransferrin (Gene Name=LTF)
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